Package: rapidphylo 0.1.2

rapidphylo: Rapidly Estimates Phylogeny from Large Allele Frequency Data Using Root Distances Method

Rapidly estimates tree-topology from large allele frequency data using Root Distances Method, under a Brownian Motion Model. See Peng et al. (2021) <doi:10.1016/j.ympev.2021.107142>.

Authors:Arindam RoyChoudhury [aut, cre, cph], Jing Peng [aut], Ying Li [aut], Laura Kubatko [aut, ths]

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rapidphylo.pdf |rapidphylo.html✨
rapidphylo/json (API)
NEWS

# Install 'rapidphylo' in R:

install.packages('rapidphylo', repos = c('https://arindamroychoudhury.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/arindamroychoudhury/rapidphylo/issues

Datasets:

Human_Allele_Frequencies - Allele frequencies from 31,000 single nucleotide polymorphisms

On CRAN:

1 exports 0.62 score 19 dependencies 147 downloads

Last updated 2 years agofrom:557e4bc4f7. Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Aug 25 2024
R-4.5-win	OK	Aug 25 2024
R-4.5-linux	OK	Aug 25 2024
R-4.4-win	OK	Aug 25 2024
R-4.4-mac	OK	Aug 25 2024
R-4.3-win	OK	Aug 25 2024
R-4.3-mac	OK	Aug 25 2024